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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Assay category
29
DNA binding
Target of assay
54
histone
histone modification
29
narrow histone mark
29
transcription factor
25
broad histone mark
1
RNA binding protein
1
recombinant protein
Date released
23
August, 2017
5
November, 2017
1
November, 2018
Available data
29
bam
29
fastq
28
bigWig
10
bed bed3+
5
bed narrowPeak
5
bigBed narrowPeak
Organism
29
Homo sapiens
Biosample type
18
tissue
6
cell line
5
in vitro differentiated cells
Organ
17
connective tissue
12
adipose tissue
6
liver
6
pancreas
Project
29
AMP
Genome assembly (visualization)
28
hg19
23
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
29
missing controlled_by
Audit category:
inconsistent control run_type
5
inconsistent control read length
lab.title!
Stephen Parker, UMich
target.investigated_as!
histone modification
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
6
cell line
HepG2
6
in vitro differentiated cells
adipocyte
5
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