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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
6
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
6
DNA accessibility
Date released
144
February, 2021
8
February, 2023
1
May, 2021
Available data
88
txt
60
bam
58
bigWig
58
tsv
4
bed bed3
2
bed narrowPeak
Organism
153
Homo sapiens
Biosample type
152
tissue
1
primary cell
Organ
794
pancreas
688
liver
606
connective tissue
459
adipose tissue
431
epithelium
324
kidney
296
heart
165
vasculature
160
blood vessel
159
bone element
121
artery
99
brain
limb
68
blood
68
bodily fluid
63
musculature of body
58
eye
25
embryo
20
lung
19
nerve
19
spleen
18
ureter
16
skeleton
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
152
AMP
1
T1D
Genome assembly (visualization)
64
hg19
60
GRCh38
Lab
152
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
lab.title!
Stephen Parker, UMich
target.investigated_as!
histone modification
organ_slims!
limb
BIOSAMPLE
ASSAY
153 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
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primary cell
megakaryocyte
1
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