Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
326
ChIP-seq
Assay category
326
DNA binding
Target of assay
326
transcription factor
108
control
102
histone modification
101
histone
81
recombinant protein
59
narrow histone mark
56
RNA binding protein
42
broad histone mark
17
chromatin remodeller
2
other context
2
other post-translational modification
Date released
232
November, 2017
46
November, 2018
33
December, 2017
11
August, 2021
4
August, 2017
Available data
322
bigWig
318
bed narrowPeak
315
fastq
314
bam
303
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
3
tar
2
bed bed3+
Organism
326
Homo sapiens
Biosample type
285
cell line
39
tissue
2
in vitro differentiated cells
Organ
326
liver
51
blood
51
bodily fluid
23
connective tissue
17
heart
13
pancreas
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
adipose tissue
5
artery
3
brain
3
embryo
1
eye
Project
326
AMP
Genome assembly (visualization)
318
hg19
282
GRCh38
Lab
315
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
27
inconsistent control
Audit category:
missing controlled_by
Audit category:
10
inconsistent control read length
2
inconsistent control run_type
lab.title!
Stephen Parker, UMich
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
326 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
285
tissue
liver
37
right lobe of liver
2
in vitro differentiated cells
hepatocyte
2
Download