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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
93
histone
93
histone modification
49
narrow histone mark
44
broad histone mark
30
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
2
December, 2017
2
June, 2019
2
November, 2017
1
May, 2019
1
May, 2021
1
November, 2019
Available data
9
bam
9
bed narrowPeak
9
bigWig
7
bigBed narrowPeak
4
fastq
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign
Organism
9
Homo sapiens
Biosample type
5
primary cell
3
in vitro differentiated cells
1
cell line
Organ
338
liver
51
blood
51
bodily fluid
35
connective tissue
17
heart
12
adipose tissue
10
kidney
9
epithelium
9
pancreas
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
9
AMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
9
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
lab.title!
Stephen Parker, UMich
month_released!
October, 2018
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
primary cell
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
in vitro differentiated cells
hepatocyte
2
pancreatic PP cell
1
cell line
EndoC_BH1
1
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