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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
1
DNase-seq
Assay category
198
DNA binding
138
Transcription
38
DNA accessibility
4
3D chromatin structure
Date released
10
August, 2021
9
February, 2023
5
May, 2021
5
November, 2019
4
February, 2021
4
October, 2019
1
August, 2017
Available data
18
bam
18
bed narrowPeak
8
bigWig
5
bed bed3
4
bed bed3+
4
bed bedgraph
3
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
1
fastq
Organism
38
Homo sapiens
Biosample type
470
tissue
288
primary cell
38
in vitro differentiated cells
31
cell line
Organ
16
connective tissue
Project
38
AMP
Genome assembly (visualization)
38
hg19
18
GRCh38
Lab
33
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Struan F.A. Grant, CHOP
Audit category:
9
inconsistent ontology term
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
38 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
7
1
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
chondrocyte
5
embryonic stem cell
5
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