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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
Assay category
93
DNA binding
Target of assay
494
histone modification
493
histone
251
narrow histone mark
242
broad histone mark
93
transcription factor
27
RNA binding protein
3
control
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
31
December, 2017
23
August, 2017
15
October, 2018
7
November, 2018
5
April, 2019
5
May, 2024
4
May, 2019
3
December, 2018
Available data
93
bigWig
88
bam
79
fastq
75
bed narrowPeak
65
bigBed narrowPeak
13
bed bed3+
Organism
93
Homo sapiens
Biosample type
309
cell line
93
tissue
37
in vitro differentiated cells
9
primary cell
Organ
39
liver
17
adipose tissue
17
connective tissue
17
pancreas
12
heart
6
spleen
3
blood vessel
3
vasculature
1
artery
Project
93
AMP
Genome assembly (visualization)
93
GRCh38
88
hg19
Lab
88
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
Audit category:
27
inconsistent control
Audit category:
18
missing controlled_by
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
93 results
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ChIP-seq
tissue
liver
37
white adipose tissue
12
body of pancreas
9
islet of Langerhans
7
spleen
6
heart left ventricle
5
left cardiac atrium
5
omental fat pad
3
right lobe of liver
2
subcutaneous adipose tissue
2
ascending aorta
1
coronary artery
1
pancreas
1
right atrium auricular region
1
thoracic aorta
1
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