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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
single cell RNA-seq
72
total RNA-seq
3
pCHi-C
1
small RNA-seq
Assay category
165
Transcription
Date released
92
August, 2021
52
February, 2021
11
July, 2019
5
March, 2020
3
February, 2020
3
May, 2021
2
October, 2019
Available data
211
bam
184
bigWig
168
tsv
151
bed narrowPeak
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
168
Homo sapiens
Biosample type
111
tissue
52
cell line
4
primary cell
1
in vitro differentiated cells
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
168
AMP
Genome assembly (visualization)
70
GRCh38
70
hg19
Lab
168
AMP-T2D consortium
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
168 results
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single cell RNA-seq
total RNA-seq
pCHi-C
small RNA-seq
tissue
heart left ventricle
18
3
1
heart right ventricle
17
1
1
right cardiac atrium
18
1
left cardiac atrium
18
heart
4
1
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cell line
smooth muscle cell of the coronary artery
52
primary cell
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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