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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ATAC-seq
34
snATAC-seq
Assay category
265
Transcription
212
DNA binding
168
DNA accessibility
5
3D chromatin structure
1
DNA sequencing
Date released
70
August, 2021
38
May, 2022
16
January, 2021
13
February, 2023
11
May, 2023
10
April, 2020
5
May, 2021
4
March, 2019
1
October, 2017
Available data
102
bed narrowPeak
64
xls
26
bigWig
20
fastq
19
bam
2
bed broadPeak
Organism
167
Homo sapiens
Biosample type
155
tissue
8
primary cell
5
in vitro differentiated cells
Organ
81
kidney
44
pancreas
20
liver
10
lung
8
blood
8
bodily fluid
Project
129
AMP
29
T1D
10
LungMap
Genome assembly (visualization)
78
GRCh38
46
hg19
Lab
AMP-T2D consortium
Klaus Kaestner, Upenn
81
Katalin Susztak, Upenn
52
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
10
Xin Sun, UCSD
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
lab.title!
Struan F.A. Grant, CHOP
Klaus Kaestner, Upenn
AMP-T2D consortium
BIOSAMPLE
ASSAY
168 results
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ATAC-seq
snATAC-seq
tissue
kidney
75
6
islet of Langerhans
34
6
liver
20
lung
10
pancreas
4
primary cell
peripheral blood mononuclear cell
8
in vitro differentiated cells
embryonic stem cell
5
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