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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
Assay category
27
DNA binding
Target of assay
221
histone
221
histone modification
123
broad histone mark
98
narrow histone mark
74
control
27
transcription factor
13
RNA binding protein
5
nucleotide modification
Date released
10
October, 2018
7
August, 2017
4
February, 2021
3
May, 2019
1
May, 2021
1
November, 2017
1
November, 2019
Available data
27
bam
27
bigWig
21
bed narrowPeak
18
fastq
14
bigBed narrowPeak
7
bed bed3+
5
tagAlign
1
bed broadPeak
1
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
20
tissue
5
cell line
1
in vitro differentiated cells
1
primary cell
Organ
338
liver
51
blood
51
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
17
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
27
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
27
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
6
missing controlled_by
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
tissue
body of pancreas
9
islet of Langerhans
7
ascending aorta
1
coronary artery
1
pancreas
1
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
4
EndoC_BH1
1
in vitro differentiated cells
pancreatic PP cell
1
primary cell
brain microvascular endothelial cell
1
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