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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
18
single cell RNA-seq
6
WGBS
3
ChIP-seq
3
snDrop-seq
Assay category
DNA accessibility
18
Transcription
6
DNA methylation
3
DNA binding
Target of assay
3
control
Date released
189
August, 2021
134
August, 2017
125
November, 2017
114
February, 2021
101
May, 2022
100
February, 2023
82
October, 2019
67
May, 2021
56
September, 2020
47
September, 2023
40
May, 2024
32
March, 2020
29
October, 2018
26
May, 2020
25
February, 2020
23
May, 2019
17
December, 2017
17
November, 2018
16
July, 2019
15
April, 2019
10
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
3
May, 2023
2
November, 2019
1
August, 2018
1
October, 2022
1
September, 2018
Available data
89
txt
18
fastq
14
tsv
6
csv
3
bam
3
tagAlign
Organism
114
Homo sapiens
Biosample type
93
tissue
18
primary cell
3
cell line
Organ
84
bone element
8
kidney
6
epithelium
6
pancreas
2
artery
2
blood vessel
2
heart
2
vasculature
1
liver
Project
96
AMP
18
HPAP
Genome assembly (visualization)
hg19
550
GRCh38
Lab
96
AMP-T2D consortium
18
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
5
audit script error
lab.title!
Xin Sun, UCSD
assay_slims!
DNA accessibility
assembly!
hg19
BIOSAMPLE
ASSAY
114 results
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Clear Filters
RNA microarray
single cell RNA-seq
WGBS
ChIP-seq
snDrop-seq
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
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primary cell
Langerhans cell
12
pancreatic alpha cell
6
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
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