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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
99
total RNA-seq
76
ATAC-seq
43
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
99
Transcription
Date released
545
February, 2021
190
May, 2020
182
May, 2021
120
July, 2018
93
February, 2023
89
August, 2017
74
August, 2021
44
July, 2019
30
October, 2019
26
May, 2022
26
September, 2018
25
February, 2020
20
November, 2019
16
September, 2020
15
February, 2018
15
March, 2020
6
April, 2018
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
May, 2023
Available data
50
tsv
49
txt
15
bam
15
bigWig
Organism
99
Homo sapiens
Biosample type
75
tissue
17
cell line
7
in vitro differentiated cells
Organ
49
kidney
12
brain
10
liver
8
embryo
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
2
pancreas
1
eye
1
nerve
1
spinal cord
Project
99
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
49
Katalin Susztak, Upenn
40
AMP-T2D consortium
10
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
lab.title!
Xin Sun, UCSD
BIOSAMPLE
ASSAY
99 results
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Clear Filters
total RNA-seq
tissue
kidney
49
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
+ See 22 more…
cell line
HepG2
9
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
7
See all biosamples
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