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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
single cell RNA-seq
27
snATAC-seq
6
WGBS
1
ATAC-seq
1
pCHi-C
1
total RNA-seq
Assay category
56
Transcription
28
DNA accessibility
6
DNA methylation
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
83
fastq
50
tsv
46
bam
45
bigWig
1
bed bed3
1
bed bed3+
1
bed narrowPeak
Organism
91
Homo sapiens
Biosample type
551
tissue
96
cell line
91
primary cell
26
in vitro differentiated cells
Organ
39
epithelium
39
pancreas
5
connective tissue
Project
46
AMP
45
HPAP
Genome assembly (visualization)
46
hg19
45
GRCh38
Lab
46
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
27
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lab.title!
Xin Sun, UCSD
BIOSAMPLE
ASSAY
91 results
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single cell RNA-seq
snATAC-seq
WGBS
ATAC-seq
pCHi-C
total RNA-seq
primary cell
Langerhans cell
12
27
pancreatic alpha cell
3
6
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
osteoblast
1
1
1
pancreatic beta cell
3
pancreatic cell
3
enteroendocrine cell
2
pancreatic stellate cell
2
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