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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
378
ChIP-seq
165
single cell RNA-seq
138
ATAC-seq
135
total RNA-seq
87
RNA microarray
27
WGBS
25
pCHi-C
17
DNase-seq
17
snATAC-seq
5
Hi-C
4
MeRIP-seq
3
snDrop-seq
2
RRBS
Assay category
135
Transcription
Date released
50
August, 2021
26
May, 2022
25
February, 2020
14
October, 2019
13
February, 2023
4
July, 2018
2
March, 2020
1
May, 2021
Available data
59
txt
30
tsv
6
bam
6
fastq
Organism
135
Homo sapiens
Biosample type
135
tissue
95
primary cell
9
cell line
9
in vitro differentiated cells
Organ
49
kidney
21
liver
20
pancreas
19
eye
12
brain
4
bone element
4
skeleton
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
epithelium
2
musculature of body
1
nerve
1
spinal cord
Project
128
AMP
7
T1D
Genome assembly (visualization)
902
GRCh38
hg19
Lab
53
AMP-T2D consortium
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
lab.title!
Xin Sun, UCSD
assembly!
hg19
BIOSAMPLE
ASSAY
135 results
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total RNA-seq
tissue
kidney
49
islet of Langerhans
32
liver
20
retina
3
pigmented layer of retina
2
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