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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
Assay category
401
Transcription
65
DNA binding
8
DNA accessibility
6
DNA methylation
Target of assay
25
histone
25
histone modification
23
control
17
transcription factor
16
broad histone mark
9
narrow histone mark
5
RNA binding protein
Date released
42
August, 2017
23
October, 2018
Available data
37
bam
37
fastq
19
bigWig
tagAlign
7
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
1
bed broadPeak
Organism
65
Homo sapiens
Biosample type
65
tissue
Organ
466
liver
199
pancreas
131
connective tissue
128
heart
122
epithelium
100
brain
96
vasculature
93
blood vessel
66
limb
65
adipose tissue
60
blood
60
bodily fluid
52
kidney
35
nerve
28
artery
24
musculature of body
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
Project
65
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
65
AMP-T2D consortium
Audit category:
12
missing controlled_by
lab.title!
Xin Sun, UCSD
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
65 results
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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
28
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
adipose tissue
2
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