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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
6
WGBS
1
ATAC-seq
Assay category
50
DNA binding
6
DNA methylation
1
DNA accessibility
Target of assay
32
histone
32
histone modification
20
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
Date released
386
February, 2021
57
August, 2017
23
October, 2018
12
July, 2019
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
18
fastq
17
bam
17
bigWig
8
tagAlign
4
bed bed3+
3
bed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed narrowPeak
1
bed broadPeak
Organism
57
Homo sapiens
Biosample type
57
tissue
Organ
188
pancreas
125
connective tissue
57
adipose tissue
54
liver
epithelium
26
musculature of body
Project
57
AMP
Genome assembly (visualization)
16
GRCh38
15
hg19
Lab
57
AMP-T2D consortium
Audit category:
12
missing controlled_by
lab.title!
Xin Sun, UCSD
organ_slims!
epithelium
BIOSAMPLE
ASSAY
57 results
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ChIP-seq
WGBS
ATAC-seq
tissue
subcutaneous abdominal adipose tissue
36
3
white adipose tissue
12
adipose tissue
2
3
subcutaneous adipose tissue
1
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