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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
4
small RNA-seq
3
single cell RNA-seq
2
pCHi-C
Assay category
12
Transcription
Target of assay
3
control
Date released
February, 2020
11
July, 2019
2
March, 2020
1
October, 2019
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
21
fastq
14
tsv
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
14
Homo sapiens
Biosample type
11
tissue
3
primary cell
Organ
476
connective tissue
416
pancreas
399
adipose tissue
173
liver
165
heart
156
epithelium
65
blood vessel
65
vasculature
58
bone element
56
artery
24
kidney
14
brain
14
embryo
7
musculature of body
4
eye
4
limb
4
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
14
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
14
AMP-T2D consortium
lab.title!
Xin Sun, UCSD
month_released!
February, 2020
BIOSAMPLE
ASSAY
14 results
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total RNA-seq
small RNA-seq
single cell RNA-seq
pCHi-C
tissue
diencephalon
1
1
frontal cortex
1
1
temporal lobe
1
1
Ammon's horn
1
brain
1
+ See 3 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
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