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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
Assay category
87
DNA binding
Target of assay
336
transcription factor
106
control
88
histone modification
87
histone
82
recombinant protein
RNA binding protein
53
narrow histone mark
34
broad histone mark
22
chromatin remodeller
2
other context
2
other post-translational modification
Date released
32
August, 2017
27
May, 2020
15
November, 2017
5
December, 2017
5
October, 2019
3
August, 2021
Available data
67
bigWig
65
bed narrowPeak
64
bam
55
tagAlign
32
fastq
23
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
Organism
87
Homo sapiens
Biosample type
69
tissue
18
cell line
Organ
187
brain
151
pancreas
102
liver
97
heart
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
87
AMP
Genome assembly (visualization)
67
hg19
54
GRCh38
Lab
84
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
lab.title!
Xin Sun, UCSD
target.investigated_as!
RNA binding protein
organ_slims!
epithelium
BIOSAMPLE
ASSAY
87 results
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Clear Filters
ChIP-seq
tissue
liver
64
right lobe of liver
5
cell line
HepG2
18
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