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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
Assay category
15
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
9
November, 2017
4
November, 2018
2
December, 2017
Available data
15
bam
15
bed narrowPeak
15
bigBed narrowPeak
15
bigWig
15
fastq
3
bed broadPeak
3
bigBed broadPeak
Organism
15
Homo sapiens
Biosample type
13
cell line
2
tissue
Organ
15
liver
5
blood
5
bodily fluid
2
connective tissue
Project
15
AMP
Genome assembly (visualization)
15
hg19
14
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
2
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
5
inconsistent control run_type
lab.title!
Xin Sun, UCSD
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
cell line
HepG2
13
tissue
liver
2
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