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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ATAC-seq
12
total RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
47
DNA accessibility
13
Transcription
Date released
125
November, 2017
124
August, 2017
111
August, 2021
97
October, 2019
96
February, 2021
81
May, 2020
61
February, 2023
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
22
May, 2021
17
December, 2017
15
April, 2019
10
November, 2018
10
October, 2017
8
February, 2018
5
December, 2018
5
December, 2019
5
January, 2018
5
July, 2019
4
January, 2019
4
July, 2018
4
September, 2017
2
November, 2019
1
August, 2018
1
August, 2022
1
May, 2022
1
October, 2022
1
September, 2018
Available data
35
bed narrowPeak
16
tsv
4
txt
Organism
60
Homo sapiens
Biosample type
44
tissue
12
primary cell
4
in vitro differentiated cells
1
cell line
Organ
36
heart
35
artery
35
blood vessel
35
vasculature
4
bone element
4
connective tissue
4
eye
4
skeleton
3
epithelium
1
pancreas
Project
61
AMP
Genome assembly (visualization)
hg19
35
GRCh38
Lab
76
Klaus Kaestner, Upenn
61
AMP-T2D consortium
23
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
assay_slims!
DNA methylation
assembly!
hg19
BIOSAMPLE
ASSAY
61 results
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Clear Filters
ATAC-seq
total RNA-seq
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
tissue
coronary artery
35
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
heart
1
+ See 3 more…
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
cell line
EndoC_BH1
1
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