Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ATAC-seq
8
total RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
80
DNA accessibility
9
Transcription
Date released
644
February, 2021
406
November, 2017
328
August, 2017
306
October, 2019
296
May, 2020
218
June, 2019
168
July, 2018
120
May, 2019
113
August, 2021
90
February, 2023
81
July, 2019
81
November, 2018
80
April, 2019
78
May, 2021
76
October, 2018
73
September, 2018
56
March, 2020
56
November, 2019
51
December, 2017
49
April, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
11
September, 2017
8
December, 2019
6
November, 2020
4
January, 2018
3
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
63
bed narrowPeak
16
tsv
5
bed bed3
4
txt
Organism
89
Homo sapiens
Biosample type
77
tissue
in vitro differentiated cells
12
primary cell
1
cell line
Organ
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
15
epithelium
8
bone element
8
skeleton
1
adipose tissue
1
brain
1
connective tissue
1
pancreas
Project
90
AMP
Genome assembly (visualization)
35
GRCh38
33
hg19
Lab
90
AMP-T2D consortium
76
Klaus Kaestner, Upenn
23
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
assay_slims!
DNA methylation
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
90 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
tissue
coronary artery
35
retina
15
2
pigmented layer of retina
12
2
acetabular part of hip bone
1
1
ilium
1
1
+ See 5 more…
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
cell line
EndoC_BH1
1
See all biosamples
Download