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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
WGBS
20
RRBS
1
DNAme array
Assay category
1506
DNA binding
995
Transcription
530
DNA accessibility
43
DNA methylation
25
3D chromatin structure
Date released
26
July, 2019
9
August, 2017
7
November, 2018
1
May, 2021
Available data
33
bed bedMethyl
33
bigBed bedMethyl
16
bam
15
bigWig
12
fastq
Organism
43
Homo sapiens
Biosample type
32
tissue
10
primary cell
1
cell line
Organ
10
heart
connective tissue
7
liver
6
adipose tissue
6
epithelium
6
musculature of body
6
pancreas
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
43
AMP
Genome assembly (visualization)
18
hg19
15
GRCh38
Lab
47
Klaus Kaestner, Upenn
43
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
43 results
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WGBS
RRBS
DNAme array
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
pancreas
2
1
aorta
2
+ See 11 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 5 more…
cell line
HepG2
1
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