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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
953
total RNA-seq
839
ChIP-seq
174
DNase-seq
105
single cell RNA-seq
94
ATAC-seq
87
RNA microarray
27
WGBS
24
pCHi-C
16
small RNA-seq
13
Hi-C
11
RRBS
4
FAIRE-seq
3
snDrop-seq
2
snATAC-seq
Assay category
174
DNA accessibility
Date released
161
June, 2019
9
November, 2018
2
August, 2017
2
October, 2019
Available data
173
bam
173
bed narrowPeak
173
bigBed narrowPeak
173
bigWig
172
bed bed3+
172
bed broadPeak
172
bigBed broadPeak
10
fastq
Organism
174
Homo sapiens
Biosample type
174
tissue
31
primary cell
2
cell line
1
in vitro differentiated cells
Organ
68
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
7
pancreas
5
blood vessel
5
vasculature
artery
4
liver
3
eye
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
174
AMP
Genome assembly (visualization)
173
GRCh38
157
hg19
Lab
174
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
artery
BIOSAMPLE
ASSAY
174 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
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