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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1305
ChIP-seq
1217
total RNA-seq
321
ATAC-seq
211
single cell RNA-seq
87
RNA microarray
36
pCHi-C
28
WGBS
21
Hi-C
21
RRBS
18
small RNA-seq
5
GRO-seq
4
FAIRE-seq
3
DNase-seq
3
snDrop-seq
2
Capture-C
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
3
DNA accessibility
Date released
3
August, 2017
October, 2019
Available data
201
bam
201
bed narrowPeak
201
bigBed narrowPeak
201
bigWig
bed broadPeak
199
bigBed broadPeak
197
bed bed3+
12
fastq
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Organ
1
liver
1
pancreas
Project
3
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
3
AMP-T2D consortium
files.file_type!
bed broadPeak
month_released!
October, 2019
BIOSAMPLE
ASSAY
3 results
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DNase-seq
tissue
islet of Langerhans
1
right lobe of liver
1
primary cell
skeletal muscle myoblast
1
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