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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
total RNA-seq
ATAC-seq
6
ChIP-seq
Assay category
122
Transcription
6
DNA binding
Target of assay
4
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
550
February, 2021
280
November, 2017
244
August, 2017
210
June, 2019
201
October, 2019
164
July, 2018
162
May, 2020
128
May, 2021
96
May, 2019
79
November, 2018
77
December, 2017
73
July, 2019
64
April, 2019
58
September, 2018
49
April, 2018
47
October, 2018
31
August, 2021
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
16
March, 2020
6
October, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
2
September, 2017
1
May, 2023
Available data
128
bam
128
bigWig
122
tsv
6
bed narrowPeak
5
tagAlign
Organism
128
Homo sapiens
Biosample type
84
in vitro differentiated cells
38
tissue
5
cell line
1
primary cell
Organ
43
pancreas
9
epithelium
3
heart
2
embryo
1
connective tissue
Project
127
AMP
1
T1D
Genome assembly (visualization)
128
GRCh38
128
hg19
Lab
135
Kyle Gaulton, UCSD
128
AMP-T2D consortium
Audit category:
73
inconsistent ontology term
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
128 results
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total RNA-seq
ChIP-seq
in vitro differentiated cells
cardiomyocytes
59
3
induced pluripotent stem cell
9
pancreatic PP cell
2
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
1
primary cell
embryonic stem cell
1
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