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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
total RNA-seq
13
ATAC-seq
2
ChIP-seq
Assay category
122
Transcription
13
DNA accessibility
2
DNA binding
Target of assay
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
563
February, 2021
206
June, 2019
203
August, 2017
200
October, 2019
164
July, 2018
162
May, 2020
137
May, 2021
91
May, 2019
79
July, 2019
76
November, 2017
72
September, 2018
59
April, 2019
56
November, 2019
49
April, 2018
41
August, 2021
35
December, 2017
35
February, 2023
32
October, 2018
31
February, 2018
16
March, 2020
16
November, 2018
13
October, 2017
12
January, 2019
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
2
December, 2018
1
May, 2023
Available data
137
bam
124
bigWig
122
tsv
15
bed narrowPeak
1
tagAlign
Organism
137
Homo sapiens
Biosample type
80
in vitro differentiated cells
38
tissue
14
primary cell
5
cell line
Organ
42
pancreas
8
epithelium
3
heart
2
embryo
1
connective tissue
Project
136
AMP
1
T1D
Genome assembly (visualization)
137
GRCh38
137
hg19
Lab
137
AMP-T2D consortium
135
Kyle Gaulton, UCSD
Audit category:
70
inconsistent ontology term
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
137 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
endothelial cell
1
+ See 9 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
primary cell
monocyte
13
embryonic stem cell
1
cell line
EndoC_BH1
4
1
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