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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
total RNA-seq
ATAC-seq
2
ChIP-seq
Assay category
122
Transcription
2
DNA binding
Target of assay
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
545
February, 2021
206
June, 2019
198
August, 2017
194
October, 2019
164
July, 2018
162
May, 2020
124
May, 2021
91
May, 2019
76
November, 2017
73
July, 2019
59
April, 2019
58
September, 2018
49
April, 2018
35
December, 2017
32
October, 2018
31
August, 2021
31
February, 2018
30
November, 2019
16
March, 2020
16
November, 2018
12
January, 2019
6
October, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
2
December, 2018
2
September, 2017
1
May, 2023
Available data
124
bam
124
bigWig
122
tsv
2
bed narrowPeak
1
tagAlign
Organism
124
Homo sapiens
Biosample type
80
in vitro differentiated cells
38
tissue
5
cell line
1
primary cell
Organ
42
pancreas
8
epithelium
3
heart
2
embryo
1
connective tissue
Project
123
AMP
1
T1D
Genome assembly (visualization)
124
GRCh38
124
hg19
Lab
135
Kyle Gaulton, UCSD
124
AMP-T2D consortium
Audit category:
70
inconsistent ontology term
target.investigated_as!
transcription factor
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
124 results
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Clear Filters
total RNA-seq
ChIP-seq
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
endothelial cell
1
+ See 9 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
1
primary cell
embryonic stem cell
1
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