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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1247
total RNA-seq
858
ChIP-seq
316
ATAC-seq
211
single cell RNA-seq
87
RNA microarray
40
pCHi-C
28
WGBS
26
Hi-C
21
RRBS
18
small RNA-seq
5
GRO-seq
3
DNase-seq
3
snDrop-seq
2
Capture-C
2
snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
3
DNA accessibility
Date released
2
October, 2019
1
August, 2017
Available data
209
bam
209
bed narrowPeak
bigBed narrowPeak
209
bigWig
206
bed broadPeak
206
bigBed broadPeak
204
bed bed3+
12
fastq
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Organ
2
epithelium
2
kidney
1
liver
Project
3
AMP
Lab
3
AMP-T2D consortium
files.file_type!
bigBed narrowPeak
assay_title!
CRISPR genome editing followed by sgRNA sequencing
BIOSAMPLE
ASSAY
3 results
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DNase-seq
primary cell
kidney glomerular epithelial cell
1
kidney tubule cell
1
tissue
right lobe of liver
1
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