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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
total RNA-seq
100
ATAC-seq
56
ChIP-seq
1
pCHi-C
Assay category
145
Transcription
100
DNA accessibility
56
DNA binding
Target of assay
29
control
27
histone
27
histone modification
27
narrow histone mark
Date released
670
February, 2021
369
August, 2017
296
May, 2020
244
October, 2019
168
July, 2018
164
May, 2021
151
August, 2021
106
July, 2019
103
February, 2023
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
49
April, 2018
44
December, 2017
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
16
April, 2019
16
October, 2017
15
November, 2018
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
6
September, 2017
5
December, 2018
5
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
249
bam
220
bigWig
144
tsv
50
tagAlign
32
bed narrowPeak
11
fastq
bigBed narrowPeak
2
bed bed3+
Organism
302
Homo sapiens
Biosample type
199
tissue
102
primary cell
1
cell line
Organ
194
liver
6
pancreas
Project
302
AMP
Genome assembly (visualization)
217
hg19
164
GRCh38
Lab
302
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
302 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
50
islet of Langerhans
6
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
cell line
HepG2
1
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