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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
single cell RNA-seq
1
RRBS
Assay category
12
DNA binding
2
Transcription
1
DNA methylation
Target of assay
12
control
Date released
13
August, 2017
1
November, 2018
1
September, 2018
Available data
429
bam
bigWig
240
fastq
181
bed narrowPeak
168
tsv
109
bigBed narrowPeak
49
bed broadPeak
49
bigBed broadPeak
35
bed bed3+
16
tagAlign
10
bed bedMethyl
10
bigBed bedMethyl
4
hdf5
2
csv
2
hic
1
bed bed3
1
bedpe bed3+
1
tar
Organism
15
Homo sapiens
Biosample type
73
tissue
55
cell line
24
in vitro differentiated cells
15
primary cell
1
stem cell
Organ
12
epithelium
12
pancreas
Project
15
AMP
Genome assembly (visualization)
1
hg19
Lab
159
Klaus Kaestner, Upenn
15
AMP-T2D consortium
files.file_type!
bigWig
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
single cell RNA-seq
RRBS
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic cell
2
skeletal muscle myoblast
1
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