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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
22
ATAC-seq
8
ChIP-seq
2
pCHi-C
1
single cell RNA-seq
Assay category
22
DNA accessibility
8
DNA binding
1
Transcription
Target of assay
5
transcription factor
3
control
Date released
406
November, 2017
322
August, 2017
298
October, 2019
218
June, 2019
152
May, 2020
120
May, 2019
117
February, 2021
94
December, 2017
88
November, 2018
87
February, 2023
80
April, 2019
74
October, 2018
47
September, 2018
43
July, 2019
42
May, 2021
41
November, 2019
38
August, 2021
35
December, 2018
25
January, 2019
24
February, 2018
22
October, 2017
19
March, 2020
11
September, 2017
8
January, 2018
4
July, 2018
2
May, 2022
2
November, 2020
1
August, 2018
1
August, 2022
1
December, 2019
1
May, 2023
1
October, 2022
Available data
572
bam
tsv
551
bigWig
89
txt
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
117
Homo sapiens
Biosample type
93
tissue
18
cell line
4
in vitro differentiated cells
2
primary cell
Organ
92
bone element
14
artery
14
blood vessel
14
heart
14
vasculature
8
skeleton
6
connective tissue
6
limb
3
liver
Project
117
AMP
Genome assembly (visualization)
29
hg19
23
GRCh38
Lab
117
AMP-T2D consortium
39
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
1
inconsistent replicate
files.file_type!
tsv
BIOSAMPLE
ASSAY
117 results
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Clear Filters
RNA microarray
ATAC-seq
ChIP-seq
pCHi-C
single cell RNA-seq
tissue
bone element
84
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 5 more…
cell line
smooth muscle cell of the coronary artery
8
6
HepG2
1
1
iPSC derived cell line
2
in vitro differentiated cells
adipocyte
4
primary cell
osteoblast
1
1
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