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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
4
ATAC-seq
Assay category
5
3D chromatin structure
4
DNA accessibility
Date released
4
February, 2021
4
July, 2019
1
October, 2019
Available data
3187
bam
2859
bigWig
1543
bed narrowPeak
1488
tsv
1163
fastq
1042
bigBed narrowPeak
320
bed broadPeak
314
tagAlign
285
bigBed broadPeak
269
bed bed3+
95
txt
36
bed bedMethyl
36
bigBed bedMethyl
18
bedpe bed3+
16
hic
12
bed bed3
8
csv
5
hdf5
4
bed bedgraph
4
tar
2
ibed
1
tagAlign bed3+
Organism
9
Homo sapiens
Biosample type
4
in vitro differentiated cells
4
primary cell
1
cell line
Organ
5
connective tissue
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
liver
1
pancreas
Project
9
AMP
Genome assembly (visualization)
9
hg19
1
GRCh38
Lab
9
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
9 results
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Hi-C
ATAC-seq
in vitro differentiated cells
adipocyte
4
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
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