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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
3
ChIP-seq
1
FAIRE-seq
Assay category
5
DNA accessibility
3
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
Date released
4
February, 2021
3
November, 2017
1
October, 2019
Available data
3187
bam
2859
bigWig
1543
bed narrowPeak
1488
tsv
1163
fastq
1042
bigBed narrowPeak
320
bed broadPeak
314
tagAlign
285
bigBed broadPeak
269
bed bed3+
95
txt
36
bed bedMethyl
36
bigBed bedMethyl
18
bedpe bed3+
16
hic
12
bed bed3
8
csv
5
hdf5
4
bed bedgraph
4
tar
2
ibed
1
tagAlign bed3+
Organism
8
Homo sapiens
Biosample type
4
in vitro differentiated cells
3
cell line
1
primary cell
Organ
4
connective tissue
3
liver
1
blood vessel
1
epithelium
1
vasculature
1
vein
Project
8
AMP
Genome assembly (visualization)
8
hg19
Lab
8
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
8 results
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ATAC-seq
ChIP-seq
FAIRE-seq
in vitro differentiated cells
adipocyte
4
cell line
HepG2
3
primary cell
endothelial cell of umbilical vein
1
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