Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1813
ChIP-seq
1362
total RNA-seq
377
ATAC-seq
212
DNase-seq
211
single cell RNA-seq
87
RNA microarray
57
pCHi-C
28
WGBS
26
Hi-C
21
RRBS
20
snATAC-seq
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
20
DNA accessibility
Date released
16
January, 2021
2
February, 2023
1
August, 2022
1
May, 2022
Available data
1
bed bed3+
1
txt
Organism
20
Homo sapiens
Biosample type
12
tissue
8
primary cell
Organ
11
pancreas
8
blood
8
bodily fluid
1
musculature of body
Project
18
T1D
2
AMP
Genome assembly (visualization)
1
hg19
Lab
48
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
2
AMP-T2D consortium
Audit category:
2
audit script error
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
tissue
islet of Langerhans
7
pancreas
4
skeletal muscle tissue
1
primary cell
peripheral blood mononuclear cell
8
Download