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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
1
ATAC-seq
1
DNase-seq
Assay category
12
Transcription
2
DNA accessibility
Date released
670
February, 2021
411
August, 2017
406
November, 2017
314
October, 2019
296
May, 2020
218
June, 2019
168
July, 2018
164
May, 2021
151
August, 2021
120
May, 2019
108
July, 2019
103
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
13
tsv
11
bam
10
bigWig
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
16
Homo sapiens
Biosample type
11
primary cell
3
tissue
2
in vitro differentiated cells
Organ
6
connective tissue
6
epithelium
5
liver
3
kidney
Project
16
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
16
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
4
audit script error
2
inconsistent ontology term
BIOSAMPLE
ASSAY
16 results
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Clear Filters
total RNA-seq
single cell RNA-seq
RNA microarray
ATAC-seq
DNase-seq
primary cell
osteoblast
4
1
1
hepatocyte
5
tissue
kidney
1
kidney interstitium
1
renal glomerulus
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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