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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
total RNA-seq
34
ATAC-seq
17
ChIP-seq
1
DNAme array
Assay category
123
Transcription
34
DNA accessibility
17
DNA binding
1
DNA methylation
Target of assay
7
control
6
histone
6
histone modification
4
narrow histone mark
4
transcription factor
2
broad histone mark
Date released
670
February, 2021
411
August, 2017
406
November, 2017
314
October, 2019
296
May, 2020
218
June, 2019
168
July, 2018
164
May, 2021
151
August, 2021
120
May, 2019
108
July, 2019
103
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
153
bam
133
bigWig
122
tsv
24
bed narrowPeak
11
fastq
6
tagAlign
5
bigBed narrowPeak
2
bed bed3+
Organism
175
Homo sapiens
Biosample type
85
in vitro differentiated cells
44
tissue
25
primary cell
21
cell line
Organ
71
pancreas
31
epithelium
3
heart
2
embryo
1
connective tissue
Project
174
AMP
1
T1D
Genome assembly (visualization)
148
GRCh38
148
hg19
Lab
235
Kyle Gaulton, UCSD
175
AMP-T2D consortium
Audit category:
89
inconsistent ontology term
BIOSAMPLE
ASSAY
175 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNAme array
in vitro differentiated cells
cardiomyocytes
59
3
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
tissue
islet of Langerhans
36
6
cardiac atrium
1
cardiac ventricle
1
primary cell
monocyte
1
13
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
embryonic stem cell
1
+ See 2 more…
cell line
EndoC_BH1
4
16
1
See all biosamples
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