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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1620
ChIP-seq
1241
total RNA-seq
342
ATAC-seq
210
single cell RNA-seq
179
DNase-seq
87
RNA microarray
39
pCHi-C
27
WGBS
20
Hi-C
16
RRBS
16
small RNA-seq
5
FAIRE-seq
5
GRO-seq
3
snDrop-seq
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
snATAC-seq
Assay category
27
DNA methylation
Date released
11
July, 2019
9
August, 2017
7
November, 2018
Available data
17
bam
16
bed bedMethyl
16
bigBed bedMethyl
16
bigWig
11
fastq
Organism
27
Homo sapiens
Biosample type
26
tissue
1
cell line
Organ
8
heart
6
adipose tissue
6
connective tissue
5
liver
4
pancreas
2
blood vessel
2
spleen
2
vasculature
1
limb
musculature of body
Project
27
AMP
Genome assembly (visualization)
16
GRCh38
Lab
47
Klaus Kaestner, Upenn
27
AMP-T2D consortium
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
27 results
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WGBS
tissue
heart left ventricle
4
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
aorta
2
+ See 7 more…
cell line
HepG2
1
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