Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
49
DNA binding
10
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
670
February, 2021
403
August, 2017
369
November, 2017
314
October, 2019
296
May, 2020
214
June, 2019
168
July, 2018
164
May, 2021
151
August, 2021
115
May, 2019
108
July, 2019
103
February, 2023
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
63
March, 2020
60
November, 2019
49
April, 2018
39
February, 2018
33
December, 2018
25
February, 2020
24
January, 2019
22
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
67
fastq
66
bam
59
bigWig
52
bed narrowPeak
52
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
67
Homo sapiens
Biosample type
40
cell line
26
tissue
1
primary cell
Organ
34
liver
13
blood
13
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
67
AMP
Genome assembly (visualization)
58
GRCh38
50
hg19
Lab
67
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
organ_slims!
urinary bladder
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
67 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
26
1
GM12878
13
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
+ See 2 more…
primary cell
pancreatic cell
1
See all biosamples
Download