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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
337
total RNA-seq
74
single cell RNA-seq
2
small RNA-seq
Assay category
413
Transcription
218
DNA binding
80
DNA accessibility
6
DNA methylation
4
3D chromatin structure
Date released
157
July, 2018
89
August, 2017
40
May, 2021
39
April, 2018
26
February, 2021
26
September, 2018
20
November, 2019
5
March, 2020
4
July, 2019
3
August, 2018
2
October, 2018
1
February, 2020
1
June, 2018
Available data
407
tsv
406
bam
406
bigWig
194
fastq
Organism
413
Homo sapiens
Biosample type
278
tissue
102
primary cell
33
cell line
Organ
481
connective tissue
413
pancreas
401
adipose tissue
166
heart
164
liver
148
epithelium
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
18
kidney
14
embryo
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
409
AMP
4
T1D
Genome assembly (visualization)
406
GRCh38
406
hg19
Lab
413
AMP-T2D consortium
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
38
inconsistent ontology term
BIOSAMPLE
ASSAY
413 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
272
body of pancreas
3
2
pancreas
1
primary cell
pancreatic alpha cell
10
12
pancreatic beta cell
10
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 4 more…
cell line
EndoC_BH1
33
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