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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
RNA microarray
Assay category
6
DNA binding
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
control
Date released
6
August, 2017
1
August, 2021
1
February, 2023
1
October, 2022
Available data
6
bam
6
bed broadPeak
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
6
fastq
6
tagAlign
1
txt
Organism
Homo sapiens
Biosample type
7
tissue
2
cell line
Organ
7
pancreas
1
adipose tissue
1
connective tissue
1
epithelium
Project
9
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
9
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
Xin Sun, UCSD
Audit category:
1
inconsistent assembly
target.investigated_as!
control
replicates.library.biosample.donor.organism.scientific_name!
Homo sapiens
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
CRISPR genome editing followed by sgRNA sequencing
MPRA
RNA microarray
tissue
pancreas
6
subcutaneous adipose tissue
1
cell line
EndoC_BH1
1
MIN6
1
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