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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
19
total RNA-seq
4
DNase-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
19
Transcription
4
DNA accessibility
2
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
18
October, 2019
6
June, 2019
4
February, 2023
1
February, 2020
1
July, 2019
Available data
6
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
30
Homo sapiens
Biosample type
26
tissue
4
primary cell
Organ
659
liver
623
connective tissue
583
pancreas
473
adipose tissue
281
heart
263
epithelium
165
brain
164
vasculature
159
blood vessel
148
kidney
146
bone element
99
limb
90
artery
82
musculature of body
59
blood
59
bodily fluid
34
nerve
30
eye
29
embryo
22
spleen
18
ureter
16
vein
4
skeleton
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
6
hg19
5
GRCh38
Lab
30
AMP-T2D consortium
target.investigated_as!
narrow histone mark
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
30 results
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Clear Filters
total RNA-seq
DNase-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
14
4
retina
3
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
2
1
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