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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
single cell RNA-seq
48
snATAC-seq
39
total RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
128
Transcription
48
DNA accessibility
Date released
54
May, 2022
40
September, 2020
39
February, 2021
39
February, 2023
4
March, 2023
Available data
100
fastq
73
zippedFastqFolder
Organism
172
Homo sapiens
Biosample type
172
primary cell
2
cell line
2
stem cell
Organ
epithelium
152
pancreas
Project
172
HPAP
4
community
Lab
3546
AMP-T2D consortium
343
Kyle Gaulton, UCSD
172
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
38
Bing Ren, UCSD
19
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
27
audit script error
organ_slims!
epithelium
BIOSAMPLE
ASSAY
176 results
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single cell RNA-seq
snATAC-seq
total RNA-seq
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
primary cell
Langerhans cell
85
48
exocrine cell
39
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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