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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
18
snATAC-seq
Assay category
172
DNA binding
125
Transcription
53
DNA accessibility
3
3D chromatin structure
1
DNA sequencing
Date released
18
May, 2022
16
January, 2021
13
February, 2023
5
May, 2021
1
March, 2019
Available data
18
bam
18
bed narrowPeak
18
fastq
5
bigWig
Organism
53
Homo sapiens
Biosample type
40
tissue
8
primary cell
5
in vitro differentiated cells
Organ
40
pancreas
8
blood
8
bodily fluid
Project
29
T1D
24
AMP
Genome assembly (visualization)
24
hg19
1
GRCh38
Lab
562
AMP-T2D consortium
97
Klaus Kaestner, Upenn
81
Katalin Susztak, Upenn
52
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
10
Xin Sun, UCSD
5
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
BIOSAMPLE
ASSAY
53 results
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ATAC-seq
snATAC-seq
tissue
islet of Langerhans
30
6
pancreas
4
primary cell
peripheral blood mononuclear cell
8
in vitro differentiated cells
embryonic stem cell
5
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