Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
5
STARR-seq
3
Hi-C
1
ATAC-seq
1
whole genome sequencing assay
Assay category
3
3D chromatin structure
1
DNA accessibility
1
DNA sequencing
Date released
8
August, 2021
2
March, 2019
Available data
tsv
2
bedpe bed3+
2
hic
1
bedpe
1
vcf
Organism
10
Homo sapiens
Biosample type
7
cell line
3
tissue
Organ
4
liver
3
pancreas
2
kidney
Project
10
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
765
AMP-T2D consortium
318
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
93
Kyle Gaulton, UCSD
47
KPMP
40
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
files.file_type!
tsv
BIOSAMPLE
ASSAY
10 results
search-icon
table-tab-icon
Clear Filters
STARR-seq
Hi-C
ATAC-seq
whole genome sequencing assay
cell line
HepG2
2
1
1
HEK293T
2
Synthesized DNA
1
tissue
islet of Langerhans
2
1
Download