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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
10
total RNA-seq
5
STARR-seq
2
Hi-C
1
whole genome sequencing assay
Assay category
10
Transcription
2
3D chromatin structure
1
DNA sequencing
Date released
18
August, 2021
March, 2019
Available data
10
tsv
2
bedpe bed3+
1
hic
1
vcf
Organism
18
Homo sapiens
Biosample type
16
cell line
2
tissue
Organ
13
liver
2
kidney
2
pancreas
Project
18
AMP
Genome assembly (visualization)
1
hg19
Lab
2253
AMP-T2D consortium
324
Klaus Kaestner, Upenn
189
Kyle Gaulton, UCSD
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
19
Xin Sun, UCSD
18
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
1
ITG
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
month_released!
March, 2019
BIOSAMPLE
ASSAY
18 results
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total RNA-seq
STARR-seq
Hi-C
whole genome sequencing assay
cell line
HepG2
9
2
1
1
HEK293T
2
Synthesized DNA
1
tissue
islet of Langerhans
1
1
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