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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ATAC-seq
20
total RNA-seq
10
snATAC-seq
9
single cell RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
33
Transcription
30
DNA accessibility
Date released
40
May, 2022
19
April, 2020
4
March, 2023
Available data
20
bed narrowPeak
20
bigWig
Organism
58
Homo sapiens
Biosample type
59
tissue
2
cell line
2
stem cell
Organ
40
liver
19
lung
Project
40
AMP
19
LungMap
4
community
Genome assembly (visualization)
20
hg19
Lab
3912
AMP-T2D consortium
343
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
BIOSAMPLE
ASSAY
63 results
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ATAC-seq
total RNA-seq
snATAC-seq
single cell RNA-seq
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
tissue
liver
20
20
lung
10
9
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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