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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ATAC-seq
10
MeRIP-seq
Assay category
21
DNA accessibility
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
20
May, 2022
10
November, 2020
1
October, 2017
Available data
21
bigWig
20
bed narrowPeak
1
bed broadPeak
1
fastq
Organism
31
Homo sapiens
Biosample type
25
tissue
6
cell line
Organ
20
liver
11
pancreas
6
epithelium
Project
31
AMP
Genome assembly (visualization)
21
hg19
1
GRCh38
Lab
2436
AMP-T2D consortium
228
Kyle Gaulton, UCSD
147
Klaus Kaestner, Upenn
82
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
31 results
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ATAC-seq
MeRIP-seq
tissue
liver
20
islet of Langerhans
1
4
cell line
EndoC_BH1
6
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