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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ATAC-seq
50
total RNA-seq
11
single cell RNA-seq
6
snATAC-seq
3
Hi-C
Assay category
82
DNA accessibility
61
Transcription
3
3D chromatin structure
Date released
130
August, 2021
14
May, 2023
2
March, 2019
Available data
64
bed narrowPeak
64
xls
57
txt
2
hic
1
bedpe
1
bedpe bed3+
1
tsv
Organism
146
Homo sapiens
Biosample type
146
tissue
34
cell line
Organ
142
kidney
4
pancreas
Project
146
AMP
Genome assembly (visualization)
76
GRCh38
3
hg19
Lab
2425
AMP-T2D consortium
142
Katalin Susztak, Upenn
52
Kyle Gaulton, UCSD
47
KPMP
40
Karen Mohlke, UNC
19
Xin Sun, UCSD
4
Bing Ren, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
BIOSAMPLE
ASSAY
146 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
Hi-C
tissue
kidney
75
49
11
6
1
islet of Langerhans
1
1
2
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