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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
total RNA-seq
31
ATAC-seq
11
single cell RNA-seq
6
snATAC-seq
1
Hi-C
Assay category
80
Transcription
37
DNA accessibility
1
3D chromatin structure
Date released
64
August, 2021
40
May, 2022
14
May, 2023
Available data
84
bed narrowPeak
xls
57
txt
20
bigWig
1
hic
Organism
118
Homo sapiens
Biosample type
118
tissue
Organ
78
kidney
40
liver
Project
118
AMP
Genome assembly (visualization)
21
hg19
11
GRCh38
Lab
3912
AMP-T2D consortium
343
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
78
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
files.file_type!
xls
BIOSAMPLE
ASSAY
118 results
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total RNA-seq
ATAC-seq
single cell RNA-seq
snATAC-seq
Hi-C
tissue
kidney
49
11
11
6
1
liver
20
20
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