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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
49
total RNA-seq
11
single cell RNA-seq
10
MeRIP-seq
6
snATAC-seq
1
Hi-C
Assay category
60
Transcription
6
DNA accessibility
1
3D chromatin structure
Target of assay
5
control
5
nucleotide modification
Date released
64
August, 2021
10
November, 2020
3
May, 2023
Available data
57
txt
1
hic
Organism
77
Homo sapiens
Biosample type
71
tissue
6
cell line
Organ
67
kidney
10
pancreas
6
epithelium
Project
77
AMP
Genome assembly (visualization)
1
hg19
Lab
3569
AMP-T2D consortium
309
Kyle Gaulton, UCSD
275
Klaus Kaestner, Upenn
67
Katalin Susztak, Upenn
47
KPMP
37
Bing Ren, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
2
Struan F.A. Grant, CHOP
1
ITG
Audit category:
6
inconsistent ontology term
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
77 results
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total RNA-seq
single cell RNA-seq
MeRIP-seq
snATAC-seq
Hi-C
tissue
kidney
49
11
6
1
islet of Langerhans
4
cell line
EndoC_BH1
6
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