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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
49
total RNA-seq
single cell RNA-seq
10
MeRIP-seq
6
snATAC-seq
1
Hi-C
Assay category
81
DNA accessibility
49
Transcription
1
3D chromatin structure
Target of assay
5
control
5
nucleotide modification
Date released
120
August, 2021
11
May, 2023
10
November, 2020
Available data
64
bed narrowPeak
64
xls
49
txt
1
hic
Organism
141
Homo sapiens
Biosample type
135
tissue
6
cell line
Organ
131
kidney
10
pancreas
6
epithelium
Project
141
AMP
Genome assembly (visualization)
75
GRCh38
1
hg19
Lab
3701
AMP-T2D consortium
343
Kyle Gaulton, UCSD
239
Klaus Kaestner, Upenn
131
Katalin Susztak, Upenn
40
Karen Mohlke, UNC
38
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
141 results
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ATAC-seq
total RNA-seq
MeRIP-seq
snATAC-seq
Hi-C
tissue
kidney
75
49
6
1
islet of Langerhans
4
cell line
EndoC_BH1
6
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